The side-chain protecting groups have to withstand repetitive treatment with trifluoroacetic acid in methylene chloride.
Derivatives of trifunctional amino acids for “standard” Boc-SPPS:
- Boc-Arg(Tos)-OH
- Boc-Asp(OcHex)-OH
- Boc-Asn(Xan)-OH
- Boc-Cys(Mob)-OH, Boc-Cys(MBzl)-OH
- Boc-Gln(Xan)-OH
- Boc-Glu(OcHex)-OH
- Boc-His(Tos)-OH
- Boc-Lys(2-chloro-Z)-OH
- Boc-Ser(Bzl)-OH
- Boc-Thr(Bzl)-OH
- Boc-Trp-OH, Boc-Trp(For)-OH
- Boc-Tyr(2-bromo-Bzl)-OH, Boc-Tyr(2,6-dichloro-Bzl)-OH
All lateral protecting groups can be removed with HF (removal of For only in the presence of a thiol).